BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016F12LP1|AL427052
(817 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1639 1600 0.0
>3x_Contig1639
Length = 14140
Score = 1600 bits (806), Expect = 0.0
Identities = 815/818 (99%), Gaps = 1/818 (0%)
Strand = Plus / Plus
Query: 1 gaaacaccagtattcagtaacaacgaaggattattcaaccaatcttgaactaatttccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4137 gaaacaccagtattcagtaacaacgaaggattattcaaccaatcttgaactaatttccat 4196
Query: 61 ttgtcagcaaccgttacatttggaaaccgtttagagtaggattctaagtacgaaaagtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4197 ttgtcagcaaccgttacatttggaaaccgtttagagtaggattctaagtacgaaaagtac 4256
Query: 121 catataggcaagaaacattgaattggttcgtttgttttgcctattaatacgttcaaccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4257 catataggcaagaaacattgaattggttcgtttgttttgcctattaatacgttcaaccac 4316
Query: 181 tctataacgtgaggtgatgatttggcatcttcaggaaacggcagaatggcttgaagatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4317 tctataacgtgaggtgatgatttggcatcttcaggaaacggcagaatggcttgaagatct 4376
Query: 241 tgcagtagctcgaccattctagagaggagttgaaggttgcaaacacgacgtatgcacgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4377 tgcagtagctcgaccattctagagaggagttgaaggttgcaaacacgacgtatgcacgtt 4436
Query: 301 cactagatagttcgagatacaggagacatctagttagacccttttctaccattgaatcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4437 cactagatagttcgagatacaggagacatctagttagacccttttctaccattgaatcat 4496
Query: 361 tgatgatactaggagtcattttaggtaaaatagaagaaacaataatctgatcatgtgacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4497 tgatgatactaggagtcattttaggtaaaatagaagaaacaataatctgatcatgtgacc 4556
Query: 421 cattgattggctttgtctttgtttccaccctccatcttgttatgacatccggatgatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4557 cattgattggctttgtctttgtttccaccctccatcttgttatgacatccggatgatgat 4616
Query: 481 aagcaccggttcgatacacaaaaagatttccttacactgttagaraggcttcatctatac 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4617 aagcaccggttcgatacacaaaaagatttccttacactgttagaaaggcttcatctatac 4676
Query: 541 ctgaataatttattactcatatttgaatctcgctatttacgtaagtagatacgattaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4677 ctgaataatttattactcatatttgaatctcgctatttacgtaagtagatacgattaata 4736
Query: 601 aagttgacatttctctttctggttcaagcttccttgaaacttctcggtattaatttaata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4737 aagttgacatttctctttctggttcaagcttccttgaaacttctcggtattaatttaata 4796
Query: 661 atgtaagcgtttctgttaatttcaccacttttcttcactttagtaagcgctattgtcagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4797 atgtaagcgtttctgttaatttcaccacttttcttcactttagtaagcgctattgtcagt 4856
Query: 721 ttttactaagatgaataatgcct-aaaaaaaaaaaatcaaaaaaaaaaaaaccgctcgaa 779
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4857 ttttactaagatgaataatgcctaaaaaaaaaaaaatcaaaaaaaaaaaaaccgctcgaa 4916
Query: 780 acgacagacaacacgaacmctgtgtcttaatgtttctg 817
|||||||||||||||||| |||||||||||||||||||
Sbjct: 4917 acgacagacaacacgaacactgtgtcttaatgtttctg 4954
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,599
Number of Sequences: 1807
Number of extensions: 18599
Number of successful extensions: 1800
Number of sequences better than 1.0e-20: 1
length of query: 817
length of database: 10,358,551
effective HSP length: 16
effective length of query: 801
effective length of database: 10,329,639
effective search space: 8274040839
effective search space used: 8274040839
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)